Selected Publications

By Year

2025

1. Deihui Kong, Aijun Zhang, Ling Li, Zuo-Fei Yuan, Yingxue Fu, Long Wu, Ashutosh Mishra, Anthony A High, Junmin Peng*, Xusheng Wang*. JUMPsem: Enzyme Activity Inference with Structural Equation Modeling. Communications Biology. 2025
2. Ling Li, Zhiping Wu, Andrea Guarracino, Flavia Villani, Deihui Kong, Ariana Mancieri, Aijun Zhang, Laura Saba, Hao Chen, Hana Brozka, Karel Vales, Anna N. Senko, Gerd Kempermann, Ales Stuchlik, Michal Pravenec, Joseph Lechner, Pjotr Prins, Ramkumar Mathur, Lu Lu, Kai Yang, Junmin Peng*, Robert W. Williams*, Xusheng Wang*. iScience. 2025
3. Suresh Poudel, Zuo-Fei Yuan, Yingxue Fu, Long Wu, Him Shrestha, Anthony A High, Junmin Peng, Xusheng Wang. JUMPlib: Integrative Search Tool Combining Fragment Ion Indexing with Comprehensive TMT Spectral Libraries. Journal of Proteome Research. 2025
4. Yingxue Fu, Zuo-Fei Yuan, Long Wu, Junmin Peng, Xusheng Wang, and Anthony A High. 2025. Addressing Sample Mix-Ups: Tools and Approaches for Large-Scale Multi-Omics Studies. Proteomics 25, 1–2 (2025), e202400271.
5. Ling Li, Mingqi Li, Yuyang Zhou, David Kakhniashvili, Xusheng Wang, Francesca-Fang Liao. OTULIN Interactome Reveals Immune Response and Autophagy Associated with Tauopathy in a Mouse Model. bioRxiv. 2025

2024

1. Suresh Poudel, Zuo-Fei Yuan, Yingxue Fu, Long Wu, Him Shrestha, Anthony A High, Junmin Peng*, Xusheng Wang*. JUMPlib: Integrative Search Tool Combining Fragment Ion Indexing with Comprehensive TMT Spectral Libraries. Journal of Proteome Research. 2024. DOI
2. Jie Luo, Mingming Niu, Ling Li, Dehui Kong, Yi Jiang, Annie Shieh, Lijun Cheng, Gina Giase, Kay Grennan, Kevin White, Chao Chen, Sidney Wang, Dalila Pinto, Yue Wang, Chunyu Liu, Junmin Peng, Xusheng Wang*. Genetic regulation of human brain proteome reveals proteins implicated in psychiatric disorders. Molecular Psychiatry. 2024; 9:1-4.
3. Kiran Kumar Reddi, Weiqiang Zhang, Shokoufeh Shahrabi-Farahani, Kenneth Mark Anderson, Mingyue Liu, David Kakhniashvili, Xusheng Wang, and Yanhui H Zhang. 2024. Tetraspanin CD82 Correlates with and May Regulate S100A7 Expression in Oral Cancer. International Journal of Molecular Sciences 25, 5 (2024), 2659.
4. Ashok Patowary, Pan Zhang, Connor Jops, Celine K Vuong, Xinzhou Ge, Kangcheng Hou, Minsoo Kim, Naihua Gong, Michael Margolis, Daniel Vo, and others. 2024. Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms. Science 384, 6698 (2024), eadh7688.
5. Tristan V de Jong, Yanchao Pan, Pasi Rastas, Daniel Munro, Monika Tutaj, Huda Akil, Chris Benner, Denghui Chen, Apurva S Chitre, William Chow, and others. 2024. A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats. Cell genomics 4, 4 (2024).
6. Bitna Lim, Yurika Matsui, Seunghyun Jung, Mohamed Nadhir Djekidel, Wenjie Qi, Zuo-Fei Yuan, Xusheng Wang, Xiaoyang Yang, Nina Connolly, Abbas Shirinifard Pilehroud, and others. 2024. Phosphorylation of the DNA damage repair factor 53BP1 by ATM kinase controls neurodevelopmental programs in cortical brain organoids. PLoS biology 22, 9 (2024), e3002760.
7. Rujia Dai, Tianyao Chu, Ming Zhang, Xuan Wang, Alexandre Jourdon, Feinan Wu, Jessica Mariani, Flora M Vaccarino, Donghoon Lee, John F Fullard, and others. 2024. Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. Science Advances 10, 21 (2024), eadh2588.
8. Gisele Nishiguchi, Lauren G Mascibroda, Sarah M Young, Elizabeth A Caine, Sherif Abdelhamed, Jeffrey J Kooijman, Darcie J Miller, Sourav Das, Kevin McGowan, Anand Mayasundari, and others. 2024. Selective CK1α degraders exert antiproliferative activity against a broad range of human cancer cell lines. Nature Communications 15, 1 (2024), 482.
9. Zachary Even, Alexandre P Meli, Antariksh Tyagi, Aurobind Vidyarthi, Neima Briggs, Dimitri A de Kouchkovsky, Yong Kong, Yaqiu Wang, Daniel A Waizman, Tyler A Rice, and others. 2024. The amalgam of naive CD4+ T cell transcriptional states is reconfigured by helminth infection to dampen the amplitude of the immune response. Immunity 57, 8 (2024), 1893–1907.
10. Yue Pan, Xusheng Wang, Jiao Sun, Chunyu Liu, Junmin Peng, and Qian Li. 2024. Multimodal joint deconvolution and integrative signature selection in proteomics. Communications Biology 7, 1 (2024), 493.
11. Him K Shrestha, DongGeun Lee, Zhiping Wu, Zhen Wang, Yingxue Fu, Xusheng Wang, Geidy E Serrano, Thomas G Beach, and Junmin Peng. 2024. Profiling Protein–Protein Interactions in the Human Brain by Refined Cofractionation Mass Spectrometry. Journal of proteome research 23, 4 (2024), 1221–1231.
12. Ju Wang, Haiyan Tan, Yingxue Fu, Ashutosh Mishra, Huan Sun, Zhen Wang, Zhiping Wu, Xusheng Wang, Geidy E Serrano, Thomas G Beach, and others. 2024. Evaluation of Protein Identification and Quantification by the diaPASEF Method on timsTOF SCP. Journal of the American Society for Mass Spectrometry 35, 6 (2024), 1253–1260.
13. Jamie A Jarusiewicz, Satoshi Yoshimura, Marisa Actis, Yong Li, Xiang Fu, Lei Yang, Shilpa Narina, Shondra M Pruett-Miller, Suiping Zhou, Xusheng Wang, and others. 2024. Development of an Orally Bioavailable LCK PROTAC Degrader as a Potential Therapeutic Approach to T-Cell Acute Lymphoblastic Leukemia. Journal of Medicinal Chemistry 67, 14 (2024), 11868–11884.
14. Chetna Soni, Antariksh Tyagi, Xusheng Wang, and Ramkumar Mathur. 2024. The molecular basis of programmed cell death and neuroinflammation in neurodegenerative diseases. Frontiers Media SA.
15. Oluwademilade Nuga, Kristin Richardson, Nikhil C Patel, Xusheng Wang, Vishwajeeth Pagala, Anna Stephan, Junmin Peng, Fabio Demontis, and Sokol V Todi. 2024. Linear poly-ubiquitin remodels the proteome and influences hundreds of regulators in Drosophila. G3: Genes, Genomes, Genetics 14, 11 (2024), jkae209.

2023

1. Masihuz Zaman, Yingxue Fu, Ping-Chung Chen, Huan Sun, Shu Yang, Zhiping Wu, Zhen Wang, Suresh Poudel, Geidy E Serrano, Thomas G Beach, Ling Li, Xusheng Wang*, Junmin Peng*. Dissecting detergent-insoluble proteome in Alzheimer’s disease by TMTc-corrected quantitative mass spectrometry. Molecular & Cellular Proteomics. 2023: 100608.
2. He Huang, Zachary Even, Zhihan Wang, Ling Li, Alyssa Erickson, Mikhail Golovko, Svetlana Golovko, Diane Darland, Ramkumar Mathur, Xusheng Wang. Proteomics profiling reveals regulation of immune response to Salmonella enterica serovar Typhimurium infection in mice. Infection and immunity. 2023
3. Liam C Hunt, Vishwajeeth Pagala, Anna Stephan, Boer Xie, Kiran Kodali, Kanisha Kavdia, Yong-Dong Wang, Abbas Shirinifard, Michelle Curley, Flavia A Graca, and others. 2023. An adaptive stress response that confers cellular resilience to decreased ubiquitination. Nature Communications 14, 1 (2023), 7348.
4. Kaushik Kumar Dey, Jay M Yarbro, Danting Liu, Xian Han, Zhen Wang, Yun Jiao, Zhiping Wu, Shu Yang, DongGeun Lee, Abhijit Dasgupta, and others. 2023. Identifying sex-specific serum patterns of Alzheimer’s mice through deep TMT profiling and a concentration-dependent concatenation strategy. Journal of proteome research 22, 12 (2023), 3843–3853.

2022

1. He Huang, Zachary Even, Alyssa Erickson, Ling Li, Mikhail Golovko, Svetlana Golovko, Ramkumar Mathur, and Xusheng Wang*. Proteomics profiling reveals regulation of immune response to Salmonella Typhimurium infection in mice. Infection and Immunity. 2022. e00499-22.
2. Xin Huang, Ling Li, Suiping Zhou, Dehui Kong, Jie Luo, Lu Lu, Hai-Ming Xu*, Xusheng Wang*. Multi-omics analysis reveals expression complexity and functional diversity of mouse kinome. Proteomics. 2022. DOI
3. Ling Li, Mingming Niu, Alyssa Erickson, Jie Luo, He Huang, Yuxin Li, Yi Jiang, Chunyu Liu, Junmin Peng, Xusheng Wang*. SMAP: A pipeline for sample matching in proteogenomics. Nature Communications. 2022. 13:744.
4. Mingqi Li, Ling Li, Sarah Asemota, David Kakhniashvili, Ramesh Narayanan, Xusheng Wang, Francesca-Fang Liao. Reciprocal interplay between OTULIN-LUBAC determines genotoxic and inflammatory NF-κB signal responses. Proceedings of the National Academy of Sciences. 2022
5. Na Zhao, Wenhui Qiao, Fuyao Li, Yingxue Ren, Jiaying Zheng, Yuka A Martens, Xusheng Wang, Ling Li, Chia-Chen Liu, Kai Chen, et al. Elevating microglia TREM2 reduces amyloid seeding and suppresses disease-associated microglia. Journal of Experimental Medicine. 2022
6. Ping-Chung Chen, Xian Han, Timothy I Shaw, Yingxue Fu, Huan Sun, Mingming Niu, Zhen Wang, Yun Jiao, Brett JW Teubner, Donnie Eddins, and others. 2022. Alzheimer’s disease-associated U1 snRNP splicing dysfunction causes neuronal hyperexcitability and cognitive impairment. Nature aging 2, 10 (2022), 923–940.
7. Chia-Chen Liu, Jing Zhao, Yuan Fu, Yasuteru Inoue, Yingxue Ren, Yuanxin Chen, Sydney V Doss, Francis Shue, Suren Jeevaratnam, Ligia Bastea, and others. 2022. Peripheral apoE4 enhances Alzheimer’s pathology and impairs cognition by compromising cerebrovascular function. Nature neuroscience 25, 8 (2022), 1020–1033.

2021

1. Erickson, Alyssa, Suiping Zhou, Jie Luo, Ling Li, He Huang, Hai-Ming Xu, Junmin Peng, Lu Lu, Xusheng Wang*. Genetic Architecture of protein expression and its regulation in the mouse brain. BMC Genomics. 2021. 22:875.
2. Zachary Even, He Huang, Ramkumar Mathur, Xusheng Wang. Genome-Wide Analysis of Methylome in the Mouse Brain using Long-Read Sequencing Technology. 2021
3. Hazal Haytural, Rui Benfeitas, Sophia Schedin-Weiss, Erika Bereczki, Melinda Rezeli, Richard D Unwin, Xusheng Wang, Eric B Dammer, Erik CB Johnson, Nicholas T Seyfried, and others. 2021. Insights into the changes in the proteome of Alzheimer disease elucidated by a meta-analysis. Scientific data 8, 1 (2021), 312.
4. Bing Bai, David Vanderwall, Yuxin Li, Xusheng Wang, Suresh Poudel, Hong Wang, Kaushik Kumar Dey, Ping-Chung Chen, Ka Yang, and Junmin Peng. 2021. Proteomic landscape of Alzheimer’s Disease: novel insights into pathogenesis and biomarker discovery. Molecular neurodegeneration 16, 1 (2021), 55.

2020

1. Xusheng Wang†*, Ji-Hoon Cho, Suresh Poudel, Yuxin Li, Drew R Jones, Timothy I Shaw, Haiyan Tan, Boer Xie, Junmin Peng*. JUMPm: A tool for large-scale identification of metabolites in untargeted metabolomics. Metabolites. 2020. 10(5):190.
2. Bing Bai†, Xusheng Wang†,*, Yuxin Li, Ping-Chung Chen, Kaiwen Yu, Kaushik Kumar Dey, Jay M Yarbro, Xian Han, Brianna M Lutz, Shuquan Rao, Yun Jiao, Jeffrey M Sifford, Jonghee Han, Minghui Wang, Haiyan Tan, Timothy I Shaw, Ji-Hoon Cho, Suiping Zhou, Hong Wang, Mingming Niu, Ariana Mancieri, Kaitlynn A Messler, Xiaojun Sun, Zhiping Wu, Vishwajeeth Pagala, Anthony A High, Wenjian Bi, Hui Zhang, Hongbo Chi, Vahram Haroutunian, Bin Zhang, Thomas G Beach, Gang Yu, Junmin Peng*. Deep multilayer brain proteomics identifies molecular networks in Alzheimer’s disease progression. Neuron. 2020. 105(6):975-91.
3. Hong Wang, Kaushik Kumar Dey, Ping-Chung Chen, Yuxin Li, Mingming Niu, Ji-Hoon Cho, Xusheng Wang, Bing Bai, Yun Jiao, Surendhar Reddy Chepyala, et al. Integrated analysis of ultra-deep proteomes in cortex, cerebrospinal fluid and serum reveals a mitochondrial signature in Alzheimer’s disease. Molecular neurodegeneration. 2020
4. Pingping Liu, Jie Luo, Qingxia Zheng, Qiansi Chen, Niu Zhai, Shengchun Xu, Yalong Xu, Lifeng Jin, Guoyun Xu, Xin Lu, et al. Integrating transcriptome and metabolome reveals molecular networks involved in genetic and environmental variation in tobacco. DNA Research. 2020
5. Maria Marti-Solano, Stephanie E Crilly, Duccio Malinverni, Christian Munk, Matthew Harris, Abigail Pearce, Tezz Quon, Amanda E Mackenzie, Xusheng Wang, Junmin Peng, et al. Combinatorial expression of GPCR isoforms affects signalling and drug responses. Nature. 2020

2019

1. Hong Wang, Alexander K Diaz, Timothy I Shaw, Yuxin Li, Mingming Niu, Ji-Hoon Cho, Barbara S Paugh, Yang Zhang, Jeffrey Sifford, Bing Bai, et al. Deep multiomics profiling of brain tumors identifies signaling networks downstream of cancer driver genes. Nature communications. 2019
2. Kaushik Kumar Dey, Hong Wang, Mingming Niu, Bing Bai, Xusheng Wang, Yuxin Li, Ji-Hoon Cho, Haiyan Tan, Ashutosh Mishra, Anthony A High, et al. Deep undepleted human serum proteome profiling toward biomarker discovery for Alzheimer’s disease. Clinical proteomics. 2019
3. Megan K Mulligan, Timothy Abreo, Sarah M Neuner, Cory Parks, Christine E Watkins, M Trevor Houseal, Thomas M Shapaker, Michael Hook, Haiyan Tan, Xusheng Wang, et al. Identification of a functional non-coding variant in the GABA A receptor α2 Subunit of the C57BL/6J mouse reference genome: Major implications for neuroscience research. Frontiers in genetics. 2019
4. Elizabeth Stewart, Justina McEvoy, Hong Wang, Xiang Chen, Victoria Honnell, Monica Ocarz, Brittney Gordon, Jason Dapper, Kaley Blankenship, Yanling Yang, et al. Identification of therapeutic targets in rhabdomyosarcoma through integrated genomic, epigenomic, and proteomic analyses. Cancer cell. 2019

2018

1. Xusheng Wang, Drew R Jones, Timothy I Shaw, Ji-Hoon Cho, Yuanyuan Wang, Haiyan Tan, Boer Xie, Suiping Zhou, Yuxin Li, Junmin Peng. Target-decoy-based false discovery rate estimation for large-scale metabolite identification. Journal of proteome research. 2018
2. Ying Cheng, Zhi-Meng Wang, Weiqi Tan, Xiaona Wang, Yujing Li, Bing Bai, Yuxin Li, Shuang-Feng Zhang, Hai-Liang Yan, Zuo-Lun Chen, et al. Partial loss of psychiatric risk gene Mir137 in mice causes repetitive behavior and impairs sociability and learning via increased Pde10a. Nature neuroscience. 2018
3. Jie Luo, Pei Xu, Peijian Cao, Hongjian Wan, Xiaonan Lv, Shengchun Xu, Gangjun Wang, Melloni N Cook, Byron C Jones, Lu Lu, et al. Integrating genetic and gene co-expression analysis identifies gene networks involved in alcohol and stress responses. Frontiers in Molecular Neuroscience. 2018
4. Jianqiao Shen, Vishwajeeth R Pagala, Alex M Breuer, Junmin Peng, Bin Ma, Xusheng Wang. Spectral library search improves assignment of TMT labeled MS/MS spectra. Journal of Proteome Research. 2018
5. Boer Xie, Yuanyuan Wang, Drew R Jones, Kaushik Kumar Dey, Xusheng Wang, Yuxin Li, Ji-Hoon Cho, Timothy I Shaw, Haiyan Tan, Junmin Peng. Isotope Labeling-Assisted Evaluation of Hydrophilic and Hydrophobic Liquid Chromatograph-Mass Spectrometry for Metabolomics Profiling. Analytical chemistry. 2018

2017

1. Anthony A High, Haiyan Tan, Vishwajeeth R Pagala, Mingming Niu, Ji-Hoon Cho, Xusheng Wang, Bing Bai, Junmin Peng. Deep proteome profiling by isobaric labeling, extensive liquid chromatography, mass spectrometry, and software-assisted quantification. Journal of visualized experiments: JoVE. 2017
2. Haiyan Tan, Kai Yang, Yuxin Li, Timothy I Shaw, Yanyan Wang, Daniel Bastardo Blanco, Xusheng Wang, Ji-Hoon Cho, Hong Wang, Sherri Rankin, et al. Integrative proteomics and phosphoproteomics profiling reveals dynamic signaling networks and bioenergetics pathways underlying T cell activation. Immunity. 2017
3. Mingming Niu, Ji-Hoon Cho, Kiran Kodali, Vishwajeeth Pagala, Anthony A High, Hong Wang, Zhiping Wu, Yuxin Li, Wenjian Bi, Hui Zhang, et al. Extensive peptide fractionation and y 1 ion-based interference detection method for enabling accurate quantification by isobaric labeling and mass spectrometry. Analytical chemistry. 2017
4. Daniel C Scott, Jared T Hammill, Jaeki Min, David Y Rhee, Michele Connelly, Vladislav O Sviderskiy, Deepak Bhasin, Yizhe Chen, Su-Sien Ong, Sergio C Chai, et al. Blocking an N-terminal acetylation-dependent protein interaction inhibits an E3 ligase. Nature chemical biology. 2017
5. JA Hanna, MR Garcia, JC Go, D Finkelstein, K Kodali, V Pagala, X Wang, J Peng, ME Hatley. PAX7 is a required target for microRNA-206-induced differentiation of fusion-negative rhabdomyosarcoma. Cell Death & Disease. 2017

2016

1. Xusheng Wang, Ashutosh K Pandey, Megan K Mulligan, Evan G Williams, Khyobeni Mozhui, Zhengsheng Li, Virginija Jovaisaite, L Darryl Quarles, Zhousheng Xiao, Jinsong Huang, et al. Joint mouse-human phenome-wide association to test gene function and disease risk. Nature communications. 2016
2. Yuxin Li, Xusheng Wang, Ji-Hoon Cho, Timothy I Shaw, Zhiping Wu, Bing Bai, Hong Wang, Suiping Zhou, Thomas G Beach, Gang Wu, et al. JUMPg: an integrative proteogenomics pipeline identifying unannotated proteins in human brain and cancer cells. Journal of proteome research. 2016
3. Joseph Mertz, Haiyan Tan, Vishwajeeth Pagala, Bing Bai, Ping-Chung Chen, Yuxin Li, Ji-Hoon Cho, Timothy Shaw, Xusheng Wang, Junmin Peng. Sequential elution interactome analysis of the mind bomb 1 ubiquitin ligase reveals a novel role in dendritic spine outgrowth. Molecular & Cellular Proteomics. 2016

2015

1. Kavisha Arora, Chandrima Sinha, Weiqiang Zhang, Chang Suk Moon, Aixia Ren, Sunitha Yarlagadda, Wolfgang R Dostmann, Adebowale Adebiyi, Yael Haberman, Lee A Denson, et al. Altered cGMP dynamics at the plasma membrane contribute to diarrhea in ulcerative colitis. The American Journal of Pathology. 2015
2. Haiyan Tan, Zhiping Wu, Hong Wang, Bing Bai, Yuxin Li, Xusheng Wang, Bo Zhai, Thomas G Beach, Junmin Peng. Refined phosphopeptide enrichment by phosphate additive and the analysis of human brain phosphoproteome. Proteomics. 2015
3. Hong Wang, Yanling Yang, Yuxin Li, Bing Bai, Xusheng Wang, Haiyan Tan, Tao Liu, Thomas G Beach, Junmin Peng, Zhiping Wu. Systematic optimization of long gradient chromatography mass spectrometry for deep analysis of brain proteome. Journal of proteome research. 2015
4. Vishwajeeth R Pagala, Anthony A High, Xusheng Wang, Haiyan Tan, Kiran Kodali, Ashutosh Mishra, Kanisha Kavdia, Yanji Xu, Zhiping Wu, Junmin Peng. Quantitative protein analysis by mass spectrometry. Protein-protein interactions: Methods and applications. 2015

2014

1. Xusheng Wang, Yuxin Li, Zhiping Wu, Hong Wang, Haiyan Tan, Junmin Peng. JUMP: a tag-based database search tool for peptide identification with high sensitivity and accuracy. Molecular & Cellular Proteomics. 2014
2. Aixia Ren, Changsuk Moon, Weiqiang Zhang, Chandrima Sinha, Sunitha Yarlagadda, Kavisha Arora, Xusheng Wang, Junming Yue, Kaushik Parthasarathi, Rick Heil-Chapdelaine, et al. Asymmetrical macromolecular complex formation of lysophosphatidic acid receptor 2 (LPA2) mediates gradient sensing in fibroblasts. Journal of Biological Chemistry. 2014
3. Ashutosh K Pandey, Lu Lu, Xusheng Wang, Ramin Homayouni, Robert W Williams. Functionally enigmatic genes: a case study of the brain ignorome. PloS one. 2014

2013

1. Bing Bai, Chadwick M Hales, Ping-Chung Chen, Yair Gozal, Eric B Dammer, Jason J Fritz, Xusheng Wang, Qiangwei Xia, Duc M Duong, Craig Street, et al. U1 small nuclear ribonucleoprotein complex and RNA splicing alterations in Alzheimer’s disease. Proceedings of the National Academy of Sciences. 2013
2. Leslie C Jellen, Lu Lu, Xusheng Wang, Erica L Unger, Christopher J Earley, Richard P Allen, Robert W Williams, Byron C Jones. Iron deficiency alters expression of dopamine-related genes in the ventral midbrain in mice. Neuroscience. 2013

2012

1. X Wang, K Mozhui, Z Li, MK Mulligan, JF Ingels, X Zhou, RT Hori, H Chen, MN Cook, RW Williams, et al. A promoter polymorphism in the Per3 gene is associated with alcohol and stress response. Translational Psychiatry. 2012
2. Megan K Mulligan, Xusheng Wang, Adrienne L Adler, Khyobeni Mozhui, Lu Lu, Robert W Williams. Complex Control of GABA (A) Receptor Subunit mRNA Expression: Variation, Covariation, and Genetic Regulation. PloS one. 2012
3. Chan-Hyun Na, Drew R Jones, Yanling Yang, Xusheng Wang, Yanji Xu, Junmin Peng. Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis. Journal of Proteome Research. 2012
4. Leslie C Jellen, Erica L Unger, Lu Lu, Robert W Williams, Sarah Rousseau, Xusheng Wang, Christopher J Earley, Richard P Allen, Michael F Miles, Byron C Jones. Systems genetic analysis of the effects of iron deficiency in mouse brain. Neurogenetics. 2012
5. Autumn M McKnite, Maria Elisa Perez-Munoz, Lu Lu, Evan G Williams, Simon Brewer, Pénélope A Andreux, John WM Bastiaansen, Xusheng Wang, Stephen D Kachman, Johan Auwerx, et al. Murine Gut Microbiota Is Defined by Host Genetics and Modulates Variation of Metabolic Traits. PloS one. 2012
6. Jesse D Ziebarth, Melloni N Cook, Xusheng Wang, Robert W Williams, Lu Lu, Yan Cui. Treatment-and Population-Dependent Activity Patterns of Behavioral and Expression QTLs. PloS one. 2012
7. ZhiHong Zhu, ChenHao Zhang, XuSheng Wang, Melloni N Cook, Robert Williams, Lu Lu, Jun Zhu. Dissecting anxiety-related QTLs in mice by univariate and multivariate mapping. Chinese Science Bulletin. 2012
8. K Mozhui, X Wang, J Chen, MK Mulligan, Z Li, J Ingles, X Chen, L Lu, RW Williams. Genetic regulation of Nrnx1 expression: an integrative cross-species analysis of schizophrenia candidate genes. Translational psychiatry. 2012